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    Manuscript Submission Readiness Pack — Journal Preflight Aud

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    A professional editorial audit for academic manuscripts to detect citation errors, journal non-compliance, and gaps.

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    Manuscript Submission Readiness Pack — Journal Preflight Aud

    Manuscript Submission Readiness Pack — Journal Preflight Aud

    Example session with this skill installed

    Please review my manuscript 'Effects of Compound X on Neural Plasticity' for submission to the Journal of Neuroscience as a Research Article. I've attached the main text and cover letter.

    • Read your context and instructions
    • Compiled the manuscript submission readiness

    I have completed the pre-submission audit for 'Effects of Compound X on Neural Plasticity'. The review identified 2 blockers and 3 high-priority consistency issues regarding the reference list and author affiliations.

    Overall Result: ACTION REQUIRED

    Submission Readiness Report

    IDCategoryStatusPriorityEvidence/LocationWhy it mattersRecommended ActionSource
    001EthicsACTION_REQUIREDBLOCKERSection 4.2Missing Data Availability Statement.Add statement describing repository or access.J. Neurosci Guidelines
    002CitationsACTION_REQUIREDBLOCKERPage 12, Ref [42]Reference [42] is listed but not cited in text.Remove reference or add citation.Internal Logic
    003ConsistencyAUTHOR_CONFIRMHIGHCover Letter vs Title PageCorresponding author email differs between documents.Sync email addresses.Internal Logic
    004InventoryFILE_NOT_PROVIDEDMEDIUMFig 1 CalloutFigure 1 is cited but no image file was provided for review.Upload Figure 1.Stage 1 Inventory
    005FormattingJOURNAL_NOT_VERIFIEDLOWAbstractAbstract is 280 words; journal may have 250-word limit.Verify exact limit.J. Neurosci (Est)

    Reference Audit

    • Total References: 45
    • Orphaned Citations: None.
    • Uncited References: [42] Miller et al. (2021).
    • Formatting: Inconsistent DOI formatting in references [12], [15], and [18].

    Declaration Checklist

    • Competing Interests: Present.
    • Funding Statement: Present.
    • Author Contributions: Missing CRediT taxonomy roles.
    • Data Availability: Missing.

    Next steps

    1. Insert the Data Availability Statement in the main manuscript.
    2. Reconcile the corresponding author email address across all submission files.
    3. Remove or place the citation for reference [42] to fix the numbering sequence.

    Connects securely to your tools. The creator never sees your data.

    About this skill

    Manuscripts are often rejected for administrative errors, inconsistent citations, or missing declarations before a peer reviewer even sees them. This skill performs a rigorous pre-submission audit to catch these friction points. It functions as a professional editorial pass, ensuring your submission package aligns with journal-specific guidelines and internal logic.

    What it does

    • Inventory validation identifies missing figures, tables, supplementary files, or required reporting checklists.
    • Journal alignment cross-references the manuscript against specific journal instructions for word counts, section headings, and blinded review rules.
    • Citation auditing maps every in-text citation to the reference list to find orphans, duplicates, or malformed DOIs.
    • Consistency checking flags discrepancies in author lists, affiliations, and funding statements across the cover letter, title page, and main text.
    • Ethics screening reviews the presence of required declarations for data availability, conflicts of interest, and IRB approvals.

    How it works

    1. Scope definition where you provide the manuscript files and the target journal name or author guidelines.
    2. Requirement verification where the agent identifies specific article-type limits and mandatory submission components.
    3. Structured analysis covering six distinct stages from structural presentation to cross-document consistency.
    4. Issue classification using a standardized priority system from BLOCKER to INFO.

    Frameworks & tools

    This skill is designed for researchers and editorial assistants working with LaTeX, Markdown, or docx-extracted text. It follows standard publishing industry workflows for academic and clinical research submissions.

    Why this beats prompting it yourself

    Generic prompts often hallucinate journal rules or miss deep citation mismatches. This skill uses a multi-stage audit logic that forces an inventory check and explicit verification of every claim against the provided documents.

    Use cases

    • Auditing a high-stakes clinical trial manuscript for CONSORT compliance and ethics statements.
    • Ensuring a blinded manuscript is truly anonymized before submitting to a double-blind journal.
    • Cleaning up a reference list after a major revision to ensure citation numbering remains intact.

    Known limitations

    Does not perform scientific, statistical, or legal review. Cannot verify the physical resolution of image files or the authenticity of external references unless tools are provided.

    Cannot verify scientific accuracy, image resolution, or external reference authenticity. Requires user-supplied journal guidelines for specific compliance checks.

    How to use

    1. 1

      Connect your agent to the Agensi MCP

      Copy the prompt and paste it into Claude, ChatGPT, Cursor or any agent that supports MCP. It sets up the connection for you. Manual setup

    2. 2

      Sign in to Agensi

      Your agent shows a sign-in link. Sign in and click Allow.

    3. 3

      Ask for what you need

      Your agent loads this skill and uses it on your task. It always asks before any payment.

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    Terminal / Shell
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    Listed24 days ago

    What's inside

    Frequently Asked Questions

    The skill identifies 'Blocker' issues like missing ethics declarations or blinded review violations, as well as 'Warnings' for citation mismatches and formatting errors that could trigger a desk rejection.

    The pack includes the structured audit logic and a set of templates for analyzing manuscript files, cover letters, and journal-specific guidelines across six distinct analysis stages.

    The skill is optimized for text extracted from LaTeX, Markdown, or .docx files, focusing on structural consistency and citation mapping rather than file format conversion.

    While the skill performs a rigorous administrative and editorial pass for consistency, it does not evaluate the scientific methodology, statistical accuracy, or legal validity of your research.

    Yes, the skill allows you to input specific journal names or author guidelines so it can cross-reference your word counts, section headings, and anonymization against their specific requirements.

    New in Technical Documentation