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    Lab Meeting Report

    1

    Turn research notes, papers, and experiment results into evidence-grounded lab meeting reports.

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    Lab Meeting Report

    Lab Meeting Report

    Example session with this skill installed

    Use lab-meeting-report to read weekly-notes.md, results.csv, and paper-notes.md in examples/weekly-summary.

    Create a concise English lab meeting report for a 10-minute discussion. Include this week's progress, a results table, failed experiments, blockers, and next actions. Preserve source references and distinguish observed results from untested ideas.

    • Read your context and instructions
    • Compiled the lab meeting report
    • Generated the data export

    Weekly Lab Meeting Report: Microscopy Segmentation

    Synthetic demonstration. All project details and results are fictional.
    Reporting period: July 6–12, 2026 | Pre-meeting report

    Weekly Overview

    Progress: Completed three seeds with the current U-Net configuration. Added stain normalization and fixed the data loader's random state. All three runs completed training.
    Sources: weekly-notes.md, results.csv

    Key evidence: Dice scores were 0.812, 0.806, and 0.809 for seed-11, seed-23, and seed-37 respectively.
    Source: results.csv

    Discussion needed: Physical batch size 4 caused an out-of-memory failure on a 16 GB GPU despite AMP and cache clearing. Decide whether to borrow a GPU with at least 24 GB or use gradient accumulation.
    Sources: weekly-notes.md, results.csv

    Previous Action Review

    ActionStatusArtifact
    Complete three seeds using the current configurationCompleteresults.csv

    Sources: weekly-notes.md, results.csv

    Experimental Results

    ConfigurationSeedBatch sizeDiceIoUPeak GPU memoryStatus
    Currentseed-1120.8120.69114.8 GBComplete
    Currentseed-2320.8060.68314.9 GBComplete
    Currentseed-3720.8090.68714.8 GBComplete

    Source: results.csv

    These observations confirm that all three runs completed. The supplied material does not establish statistically significant improvement.

    Failed Attempts and Evidence Limits

    Boundary dropout: Dice was 0.774 for seed-23, compared with 0.806 for the current configuration using the same seed. This week's evidence does not support retaining this branch.

    Physical batch size 4: Training failed at the first optimizer step on the 16 GB GPU. AMP and cache clearing did not resolve the failure.

    Sources: weekly-notes.md, results.csv

    Literature idea: The boundary-aware auxiliary loss in the paper notes was studied on fluorescence microscopy. Its applicability to the current bright-field data is unknown, and it has not been implemented in this project.

    Source: paper-notes.md

    Blocker and Requested Decision

    The current GPU cannot complete training with physical batch size 4.

    Choose between

    1. Borrowing a GPU with at least 24 GB to test physical batch size 4.
    2. Keeping physical batch size 2 and using gradient accumulation for effective batch size 4.

    Source: weekly-notes.md

    Next Actions

    ActionDeliverableCompletion criterion
    Run the batch configuration experiment using the agreed routeTraining logs and a comparison table for three seedsAll runs finish without OOM; record Dice, IoU, and peak GPU memory
    Assess the boundary-aware auxiliary lossA documented keep-or-defer decisionUse the current configuration as comparator; do not treat paper results as results on this dataset

    If no 24 GB GPU is available, proceed with gradient accumulation. No performance improvement threshold has been predefined.

    Sources: weekly-notes.md, paper-notes.md

    Sources

    • weekly-notes.md
    • results.csv
    • paper-notes.md

    results.csv

    CSV · data export

    Generated

    Example file from a real run - the skill writes it into your workspace.

    Connects securely to your tools. The creator never sees your data.

    About this skill

    Prepare your next lab meeting from the research material you already have.

    Turn weekly notes, papers, experiment results, figures, and code changes into a concise Markdown report covering progress, evidence, blockers, and next steps.

    • Create weekly research summaries, progress reports, and journal club notes.
    • Preserve failed experiments, negative results, and uncertainty.
    • Keep facts, interpretations, and hypotheses distinct.
    • Avoid invented metrics, citations, and explanations.
    • Generate reports in Chinese or English.
    • Use optional guidance for presentation preparation and Feishu/Lark or Notion publishing.

    Getting started

    “Use lab-meeting-report to read my weekly notes, results, and paper notes, then prepare a report for a 10-minute lab meeting.”

    Open source under the MIT license.

    How to use

    Skills on Agensi run inside your AI agent. Copy the prompt, paste it into your agent, and it connects to Agensi and installs this skill for you. If a payment is needed, your agent shows it to you first.

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    Requires

    macOS
    official MCP
    Get Started With MCP
    Notion MCP

    Listed6 days ago
    Updated4 days ago

    What's inside

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